PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan002368
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family ZF-HD
Protein Properties Length: 342aa    MW: 37536.5 Da    PI: 8.1539
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-183a-Artemisia_annua-154688PU_refplantGDBView CDS
gnl|UG|Aan#S41930565PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-82981PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer100.71e-3163118357
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrev 57 
                   v YkeClkNhAa++Gghav GCgEfmps++++ + +++lkCaACgCHRnFHRre+
    Aan002368  63 VVSYKECLKNHAATMGGHAVHGCGEFMPSPSSSpSLPTSLKCAACGCHRNFHRREH 118
                  589***************************999999******************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD1257742.0E-1844117IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PfamPF047701.4E-2664118IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMsTIGR015663.1E-2866117IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152325.94266117IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Gene3DG3DSA:1.10.10.604.9E-20207260IPR009057Homeodomain-like
SuperFamilySSF466892.99E-9207259IPR009057Homeodomain-like
TIGRFAMsTIGR015655.7E-21209255IPR006455Homeodomain, ZF-HD class
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    Send to blast
MEISPPPPPP STTITTTAAT TVKTPDPESE PPKQPIPPPF TNGVLKRHKP FNHHHQPLAP  60
PVVVSYKECL KNHAATMGGH AVHGCGEFMP SPSSSPSLPT SLKCAACGCH RNFHRREHYH  120
FQPPSPPPMP HLLEYQPHNR HEPPPPPPQP PITTTTSPLN SPSSPPPISS SYYPSAAPHM  180
LLALGSETNH YSTTPMRAKT DLEHSSXQAQ KDKMHEVASK VGWKMQKRDE EMINSFCNEI  240
GVDRNVFKVW MHNNKSTNKN NENLGHGHAS SNNNNIINVN NINGHDAIDF IMSRNINNNN  300
NNNVSSSHNN DVINGSNNIN NNNNHDLHLV SGNVIKGSSS SC
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011085755.12e-67PREDICTED: zinc-finger homeodomain protein 9
TrEMBLA0A118K1I36e-81A0A118K1I3_CYNCS; Homeodomain-like protein
STRINGSolyc02g067320.1.12e-66(Solanum lycopersicum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15210.12e-40homeobox protein 30